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nebnext end prep master mix  (New England Biolabs)


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    New England Biolabs nebnext end prep master mix
    Nebnext End Prep Master Mix, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 1915 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/nebnext+ultra+ii+end+repair+da+tailing+module/NEBNext+Ultra+II+End+Repair%2FdA-Tailing+Module/pm42906542-1219-20-20
    Average 99 stars, based on 1915 article reviews
    nebnext end prep master mix - by Bioz Stars, 2026-11
    99/100 stars

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    Control:

    Article Title: Schistosoma Species and Hybrid Genotyping With a Field Deployable Multi‐Marker Amplicon Panel
    Article Snippet: .. Oxford Nanopore Technologies Native Barcoding Kit 24 V14 (SQK‐NBD114.24) or Native Barcoding Kit 96 V14 (SQK‐NBD114.96): Native Barcode plate (NB01‐24 or NB01‐96) DNA Control Sample (DCS) Native Adapter (NA) Sequencing Buffer (SB) Library Beads (LIB) Library Solution (LIS) Elution Buffer (EB) AMPure XP Beads (AXP) Long Fragment Buffer (LFB) Short Fragment Buffer (SFB) EDTA Flow Cell Flush (FCF) Flow Cell Tether (FCT) New England Biolabs (NEB) specific reagents for Oxford Nanopore Technologies: NEBNext Ultra II End Repair/dA‐Tailing module (NEB, E7546) NEB Blunt/TA Ligase master mix (NEB, M0367) NEBNext Quick Ligation module (NEB, E6056) 200 fmol (130 ng for 1 kb amplicons) DNA per sample to be barcoded Qubit dsDNA HS assay kit (Thermo Fisher, Q32851 ) Ice bucket with ice Mini centrifuge 0.2‐ml non‐skirted low profile 96‐well PCR plate (Thermo Scientific, AB‐700) Microseal “B” seals (BioRad, MSB1001) Microplate centrifuge HulaMixer, i.e., gentle rotator mixer Invitrogen DynaMag‐96 Side (Thermo Fisher, 12331D) Qubit assay tubes (Invitrogen, Q32856 ) MinION Mk1B (Oxford Nanopore Technologies) R10.4.1 flow cells (Oxford Nanopore Technologies, FLO‐MIN114) ..

    Sequencing:

    Article Title: Schistosoma Species and Hybrid Genotyping With a Field Deployable Multi‐Marker Amplicon Panel
    Article Snippet: .. Oxford Nanopore Technologies Native Barcoding Kit 24 V14 (SQK‐NBD114.24) or Native Barcoding Kit 96 V14 (SQK‐NBD114.96): Native Barcode plate (NB01‐24 or NB01‐96) DNA Control Sample (DCS) Native Adapter (NA) Sequencing Buffer (SB) Library Beads (LIB) Library Solution (LIS) Elution Buffer (EB) AMPure XP Beads (AXP) Long Fragment Buffer (LFB) Short Fragment Buffer (SFB) EDTA Flow Cell Flush (FCF) Flow Cell Tether (FCT) New England Biolabs (NEB) specific reagents for Oxford Nanopore Technologies: NEBNext Ultra II End Repair/dA‐Tailing module (NEB, E7546) NEB Blunt/TA Ligase master mix (NEB, M0367) NEBNext Quick Ligation module (NEB, E6056) 200 fmol (130 ng for 1 kb amplicons) DNA per sample to be barcoded Qubit dsDNA HS assay kit (Thermo Fisher, Q32851 ) Ice bucket with ice Mini centrifuge 0.2‐ml non‐skirted low profile 96‐well PCR plate (Thermo Scientific, AB‐700) Microseal “B” seals (BioRad, MSB1001) Microplate centrifuge HulaMixer, i.e., gentle rotator mixer Invitrogen DynaMag‐96 Side (Thermo Fisher, 12331D) Qubit assay tubes (Invitrogen, Q32856 ) MinION Mk1B (Oxford Nanopore Technologies) R10.4.1 flow cells (Oxford Nanopore Technologies, FLO‐MIN114) ..

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Ligation:

    Article Title: Schistosoma Species and Hybrid Genotyping With a Field Deployable Multi‐Marker Amplicon Panel
    Article Snippet: .. Oxford Nanopore Technologies Native Barcoding Kit 24 V14 (SQK‐NBD114.24) or Native Barcoding Kit 96 V14 (SQK‐NBD114.96): Native Barcode plate (NB01‐24 or NB01‐96) DNA Control Sample (DCS) Native Adapter (NA) Sequencing Buffer (SB) Library Beads (LIB) Library Solution (LIS) Elution Buffer (EB) AMPure XP Beads (AXP) Long Fragment Buffer (LFB) Short Fragment Buffer (SFB) EDTA Flow Cell Flush (FCF) Flow Cell Tether (FCT) New England Biolabs (NEB) specific reagents for Oxford Nanopore Technologies: NEBNext Ultra II End Repair/dA‐Tailing module (NEB, E7546) NEB Blunt/TA Ligase master mix (NEB, M0367) NEBNext Quick Ligation module (NEB, E6056) 200 fmol (130 ng for 1 kb amplicons) DNA per sample to be barcoded Qubit dsDNA HS assay kit (Thermo Fisher, Q32851 ) Ice bucket with ice Mini centrifuge 0.2‐ml non‐skirted low profile 96‐well PCR plate (Thermo Scientific, AB‐700) Microseal “B” seals (BioRad, MSB1001) Microplate centrifuge HulaMixer, i.e., gentle rotator mixer Invitrogen DynaMag‐96 Side (Thermo Fisher, 12331D) Qubit assay tubes (Invitrogen, Q32856 ) MinION Mk1B (Oxford Nanopore Technologies) R10.4.1 flow cells (Oxford Nanopore Technologies, FLO‐MIN114) ..

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Polymerase Chain Reaction:

    Article Title: Schistosoma Species and Hybrid Genotyping With a Field Deployable Multi‐Marker Amplicon Panel
    Article Snippet: .. Oxford Nanopore Technologies Native Barcoding Kit 24 V14 (SQK‐NBD114.24) or Native Barcoding Kit 96 V14 (SQK‐NBD114.96): Native Barcode plate (NB01‐24 or NB01‐96) DNA Control Sample (DCS) Native Adapter (NA) Sequencing Buffer (SB) Library Beads (LIB) Library Solution (LIS) Elution Buffer (EB) AMPure XP Beads (AXP) Long Fragment Buffer (LFB) Short Fragment Buffer (SFB) EDTA Flow Cell Flush (FCF) Flow Cell Tether (FCT) New England Biolabs (NEB) specific reagents for Oxford Nanopore Technologies: NEBNext Ultra II End Repair/dA‐Tailing module (NEB, E7546) NEB Blunt/TA Ligase master mix (NEB, M0367) NEBNext Quick Ligation module (NEB, E6056) 200 fmol (130 ng for 1 kb amplicons) DNA per sample to be barcoded Qubit dsDNA HS assay kit (Thermo Fisher, Q32851 ) Ice bucket with ice Mini centrifuge 0.2‐ml non‐skirted low profile 96‐well PCR plate (Thermo Scientific, AB‐700) Microseal “B” seals (BioRad, MSB1001) Microplate centrifuge HulaMixer, i.e., gentle rotator mixer Invitrogen DynaMag‐96 Side (Thermo Fisher, 12331D) Qubit assay tubes (Invitrogen, Q32856 ) MinION Mk1B (Oxford Nanopore Technologies) R10.4.1 flow cells (Oxford Nanopore Technologies, FLO‐MIN114) ..

    Gentle:

    Article Title: Schistosoma Species and Hybrid Genotyping With a Field Deployable Multi‐Marker Amplicon Panel
    Article Snippet: .. Oxford Nanopore Technologies Native Barcoding Kit 24 V14 (SQK‐NBD114.24) or Native Barcoding Kit 96 V14 (SQK‐NBD114.96): Native Barcode plate (NB01‐24 or NB01‐96) DNA Control Sample (DCS) Native Adapter (NA) Sequencing Buffer (SB) Library Beads (LIB) Library Solution (LIS) Elution Buffer (EB) AMPure XP Beads (AXP) Long Fragment Buffer (LFB) Short Fragment Buffer (SFB) EDTA Flow Cell Flush (FCF) Flow Cell Tether (FCT) New England Biolabs (NEB) specific reagents for Oxford Nanopore Technologies: NEBNext Ultra II End Repair/dA‐Tailing module (NEB, E7546) NEB Blunt/TA Ligase master mix (NEB, M0367) NEBNext Quick Ligation module (NEB, E6056) 200 fmol (130 ng for 1 kb amplicons) DNA per sample to be barcoded Qubit dsDNA HS assay kit (Thermo Fisher, Q32851 ) Ice bucket with ice Mini centrifuge 0.2‐ml non‐skirted low profile 96‐well PCR plate (Thermo Scientific, AB‐700) Microseal “B” seals (BioRad, MSB1001) Microplate centrifuge HulaMixer, i.e., gentle rotator mixer Invitrogen DynaMag‐96 Side (Thermo Fisher, 12331D) Qubit assay tubes (Invitrogen, Q32856 ) MinION Mk1B (Oxford Nanopore Technologies) R10.4.1 flow cells (Oxford Nanopore Technologies, FLO‐MIN114) ..

    other:

    Article Title: Cell-free DNA methylome and fragmentome analysis for relapse monitoring of Ewing sarcoma
    Article Snippet: NEBNext Ultra II End-Repair/dA-Tailing Module , New England Biolabs , E7646L.

    Amplification:

    Article Title: Development and evaluation of a real-time RT-PCR assay for Mammarenavirus guanaritoense virus detection
    Article Snippet: .. Amplicon (130 ng) was repaired using the NEBNext Ultra II End Repair/dA Tailing Module (NEB, USA). .. Barcodes were ligated with NEB Blunt/TA Ligase Master Mix, and adapter ligation was performed with the NEBNext Quick Ligation Module (NEB, USA).

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Whole-Genome Sequencing:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Quantitative RT-PCR:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Platinum:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    DNA Library Preparation:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Purification:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.

    Generated:

    Article Title: Detection of highly pathogenic avian influenza A(H5N1) virus, clade 2.3.4.4b, genotype B3.13 in placentas from aborted bovine fetuses.
    Article Snippet: Additional swabs were collected aseptically from the chorioallantoic membrane (cases 2–5) and amnion (case 1) in transport medium (PrimeStore; ThermoFisher) for molecular testing. .. In preparation for whole-genome sequencing, the 8 influenza gene segments were amplified simultaneously in a single reaction using an RT-qPCR assay14–16 with the following universal primers: MBTuni-12 (0.1 μM), MBTuni-12.4 (0.1 μM), and MBTuni-13 (0.2 μM).18 A 25-μL reaction was used (Invitrogen Superscript III one-step RT-qPCR system, Platinum Taq DNA polymerase high fidelity; ThermoFisher), along with the following thermocycling reactions: 60 min at 42°C, 2 min at 94°C, then 5 cycles of 30 s at 94°C, 30 s at 44°C, 3 min at 68°C, followed by 31 cycles of 30 s at 94°C, 30 s at 57°C, 3 min at 68°C, and a final extension at 68°C for 7 min. For DNA library preparation, 500 ng of purified universal RT-qPCR amplicon from each sample was used as input for a library generated with the ligation sequencing kit SQK-LSK114 (Oxford Nanopore Technologies [ONT]).7 First, DNA was end-repaired using the NEBNext Ultra II end repair/dA tailing module (New England Biolabs), purified using AMPure XP beads (Beckman Coulter) in a ratio of 1:1 volume of beads per sample, and eluted in 30 μL of nucleasefree water. .. Sequencing adapters (AMX; ONT) were ligated to the DNA (Blunt/TA ligation master mix; New England Biolabs) by incubation at room temperature for 10 min.



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    Image Search Results


    Journal: iScience

    Article Title: Gapmers targeting conserved SARS-CoV-2 single-stranded regions reduce viral load and reshape inflammatory macrophage responses

    doi: 10.1016/j.isci.2026.117639

    Figure Lengend Snippet:

    Article Snippet: End Prep library kit , NEB , E7546.

    Techniques: Virus, Variant Assay, Recombinant, Reverse Transcription, Diagnostic Assay, Luminex, Ligation, Multiplex Assay, Generated, Software